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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL42190.1ABC-2 family transporter protein. (369 aa)    
Predicted Functional Partners:
yxlF_3
Putative ABC transporter ATP-binding protein YxlF.
 
  
 0.975
gbuC
Glycine betaine/carnitine transport binding protein GbuC precursor.
  
  
  0.895
osmF
Putative osmoprotectant uptake system substrate-binding protein OsmF precursor.
    
  0.875
pstS3
Phosphate-binding protein PstS 3 precursor; Part of the ABC transporter complex PstSACB involved in phosphate import; Belongs to the PstS family.
     
 0.868
KJL44261.1
Hypothetical protein.
  
  
  0.730
KJL41510.1
TOBE domain protein.
 
  
  0.706
potA_1
Spermidine/putrescine import ATP-binding protein PotA.
    
  0.689
fbpC
Fe(3+) ions import ATP-binding protein FbpC.
    
  0.689
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
    
  0.689
nikA
Nickel-binding periplasmic protein precursor.
  
  
  0.680
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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