STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fgdF420-dependent glucose-6-phosphate dehydrogenase. (263 aa)    
Predicted Functional Partners:
KJL41057.1
Putative nitroreductase.
  
  
  0.770
fgd1_3
F420-dependent glucose-6-phosphate dehydrogenase.
  
     0.769
fbiB
Coenzyme F420:L-glutamate ligase.
  
   
 0.711
cofD
2-phospho-L-lactate transferase.
  
   
 0.700
KJL42334.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
     0.645
ddn_2
Deazaflavin-dependent nitroreductase.
  
  
  0.639
KJL42214.1
Hypothetical protein.
       0.590
KJL42212.1
Hypothetical protein.
       0.588
KJL41934.1
Phthiodiolone/phenolphthiodiolone dimycocerosates ketoreductase.
  
     0.586
pkn1_1
Serine/threonine-protein kinase pkn1.
  
    0.533
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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