STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL42366.1Hypothetical protein. (497 aa)    
Predicted Functional Partners:
KJL42367.1
AAA-like domain protein.
 
     0.948
KJL42365.1
Hypothetical protein.
     
 0.820
KJL45746.1
TraM recognition site of TraD and TraG.
 
   
 0.799
KJL45715.1
TraM recognition site of TraD and TraG.
 
   
 0.799
KJL45744.1
Hypothetical protein.
 
     0.782
KJL45713.1
Hypothetical protein.
 
     0.782
KJL41693.1
AAA-like domain protein.
 
     0.782
KJL42364.1
Hypothetical protein.
       0.774
recD2_2
ATP-dependent RecD-like DNA helicase.
  
     0.716
KJL40710.1
Hypothetical protein.
  
     0.700
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.