STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41786.1Transcriptional regulator SlyA. (178 aa)    
Predicted Functional Partners:
ptsG
PTS system glucose-specific EIICBA component.
   
 
 0.757
cdhR_2
HTH-type transcriptional regulator CdhR.
   
    0.712
ytcD
Putative HTH-type transcriptional regulator YtcD.
   
    0.700
KJL43784.1
Hypothetical protein.
   
    0.628
cobB_1
NAD-dependent protein deacylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.625
cobB_2
NAD-dependent protein deacetylase.
   
    0.625
KJL41789.1
Hypothetical protein; Cytochrome b(N-terminal)/b6/petB.
 
     0.569
KJL43588.1
PTS system beta-glucoside-specific transporter subunits IIABC.
     
 0.508
etfB_2
Electron transfer flavoprotein subunit beta.
       0.506
etfA_2
Electron transfer flavoprotein subunit alpha.
       0.497
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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