STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41793.1Hypothetical protein. (284 aa)    
Predicted Functional Partners:
nreB
Oxygen sensor histidine kinase NreB.
 
    0.934
degU_2
Transcriptional regulatory protein DegU.
 
    0.835
KJL41790.1
Pentapeptide repeats (8 copies).
   
   0.743
KJL41254.1
Hypothetical protein.
  
 
   0.681
KJL40677.1
Hypothetical protein.
  
     0.623
KJL44159.1
Hypothetical protein.
  
     0.620
KJL40736.1
Hypothetical protein.
  
     0.617
yneA
Cell division suppressor protein YneA.
    
   0.574
KJL43233.1
Hypothetical protein.
    
   0.574
sle1
N-acetylmuramoyl-L-alanine amidase sle1 precursor.
    
   0.574
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.