STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41812.1Hypothetical protein. (561 aa)    
Predicted Functional Partners:
KJL41813.1
Hypothetical protein.
  
 0.995
KJL41814.1
Hypothetical protein; Bacterial transglutaminase-like N-terminal region.
 
    0.978
ybdK_1
Carboxylate-amine ligase YbdK; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity; Belongs to the glutamate--cysteine ligase type 2 family. YbdK subfamily.
   
  0.973
KJL41115.1
Transglutaminase-like superfamily protein.
 
    0.815
KJL44157.1
Transglutaminase-like superfamily protein.
 
    0.814
pepN_2
Aminopeptidase N.
    
  0.759
ywrD
Putative gamma-glutamyltransferase YwrD.
    
  0.754
gshB
Glutathione synthetase; Belongs to the prokaryotic GSH synthase family.
    
  0.743
gdhA_1
NADP-specific glutamate dehydrogenase.
   
 
  0.607
gdhA_2
Glutamate dehydrogenase.
   
 
  0.607
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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