STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41818.1Beta-lactamase. (329 aa)    
Predicted Functional Partners:
rhaB
Rhamnulokinase.
       0.773
tsaC1_2
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2.
       0.773
nlhH_4
Carboxylesterase NlhH.
       0.594
dacF
D-alanyl-D-alanine carboxypeptidase DacF precursor.
  
  
 0.589
KJL42823.1
D-alanyl-D-alanine endopeptidase; Belongs to the peptidase S11 family.
  
  
 0.588
KJL41940.1
Collagen triple helix repeat (20 copies).
  
  
  0.549
guaA_1
GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP.
     
 0.533
KJL43092.1
EamA-like transporter family protein.
  
     0.509
hpt
Hypoxanthine-guanine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family.
    
  0.494
rhaM
L-rhamnose mutarotase.
 
     0.467
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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