STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmE_4Multiple sugar-binding protein precursor. (440 aa)    
Predicted Functional Partners:
araP_2
L-arabinose transport system permease protein AraP.
 
  0.986
sugB_3
Trehalose transport system permease protein SugB.
 
  0.968
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
 0.893
araP_4
L-arabinose transport system permease protein AraP.
   
  0.864
cysA_1
Sulfate/thiosulfate import ATP-binding protein CysA; Belongs to the ABC transporter superfamily.
   
  0.780
sugB_5
Trehalose transport system permease protein SugB.
   
  0.731
ugpA_1
Sn-glycerol-3-phosphate transport system permease protein UgpA.
   
  0.727
araP_1
L-arabinose transport system permease protein AraP.
   
  0.727
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
   
  0.727
lacF_6
Lactose transport system permease protein LacF.
   
  0.727
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.