STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41829.1Bacterial alpha-L-rhamnosidase. (941 aa)    
Predicted Functional Partners:
tsaC1_2
4-formylbenzenesulfonate dehydrogenase TsaC1/TsaC2.
 
  0.809
KJL42569.1
3-ketoacyl-(acyl-carrier-protein) reductase.
  
  0.796
acr1_1
Fatty acyl-CoA reductase.
   
  0.759
ydaD_1
General stress protein 39.
   
  0.759
lvr_1
Levodione reductase.
   
  0.759
fabG_2
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
   
  0.759
linC
2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase.
   
  0.759
gno_1
Gluconate 5-dehydrogenase.
   
  0.759
bdhA
D-beta-hydroxybutyrate dehydrogenase.
   
  0.759
KJL43493.1
3-ketoacyl-(acyl-carrier-protein) reductase.
   
  0.759
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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