STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypBA1_3Non-reducing end beta-L-arabinofuranosidase. (663 aa)    
Predicted Functional Partners:
KJL41834.1
Hypothetical protein.
 
     0.882
rlp2
Ribulose bisphosphate carboxylase-like protein 2; Belongs to the RuBisCO large chain family.
 
     0.871
idi_3
Isopentenyl-diphosphate Delta-isomerase.
       0.732
KJL41840.1
Asp/Glu/Hydantoin racemase.
 
     0.689
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
     0.685
KJL41845.1
Putative endoglucanase.
  
     0.660
KJL42833.1
Hypothetical protein.
  
     0.625
KJL44601.1
Hypothetical protein.
  
     0.615
lacZ_1
Beta-galactosidase; Belongs to the glycosyl hydrolase 2 family.
  
     0.605
afuB
Exo-alpha-(1->6)-L-arabinofuranosidase.
 
     0.571
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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