Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
msmE_5Multiple sugar-binding protein precursor. (447 aa)    
Predicted Functional Partners:
lacF_7
Lactose transport system permease protein LacF.
 
 0.947
araQ_7
L-arabinose transport system permease protein AraQ.
 
  0.917
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
   
 0.890
araP_4
L-arabinose transport system permease protein AraP.
 
  0.810
sugB_5
Trehalose transport system permease protein SugB.
   
  0.758
ugpA_1
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.703
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
  
  0.703
KJL41834.1
Hypothetical protein.
 
     0.675
yesO_9
Putative ABC transporter substrate-binding protein YesO.
  
     0.636
KJL41840.1
Asp/Glu/Hydantoin racemase.
 
     0.628
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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