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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL41850.1Xylose isomerase-like TIM barrel. (264 aa)    
Predicted Functional Partners:
KJL41849.1
Cyclohexadienyl dehydrogenase.
 
  
  0.954
KJL41847.1
Hypothetical protein.
 
     0.883
fabG_8
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
 
     0.842
KJL41851.1
Hypothetical protein.
       0.773
fruA
PTS system fructose-specific EIIABC component.
  
 
  0.723
KJL41834.1
Hypothetical protein.
  
     0.647
lutR_1
HTH-type transcriptional regulator LutR.
  
     0.640
KJL42924.1
Hypothetical protein.
    
   0.618
KJL41840.1
Asp/Glu/Hydantoin racemase.
  
     0.604
hisS
Histidine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.
       0.563
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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