STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ctpFPutative cation-transporting ATPase F. (923 aa)    
Predicted Functional Partners:
nhaK_1
Sodium, potassium, lithium and rubidium/H(+) antiporter.
    
 0.765
KJL43686.1
Zn-finger in ubiquitin-hydrolases and other protein.
    
 0.765
KJL42268.1
Zn-finger in ubiquitin-hydrolases and other protein.
    
 0.765
nhaK_2
Sodium, potassium, lithium and rubidium/H(+) antiporter.
    
 0.765
nhaG
Na(+)/H(+) antiporter NhaG.
    
 0.765
narB
Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily.
    
 0.748
KJL45388.1
Putative ABC transporter ATP-binding protein.
   
  0.712
KJL45389.1
Putative ABC transporter ATP-binding protein.
   
  0.712
KJL44872.1
Putative multidrug export ATP-binding/permease protein.
   
  0.712
KJL44594.1
Putative multidrug export ATP-binding/permease protein.
   
  0.712
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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