STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
nfdA_3N-substituted formamide deformylase precursor. (583 aa)    
Predicted Functional Partners:
ygiS
Putative binding protein YgiS precursor.
 
     0.758
gsiD_3
Glutathione transport system permease protein GsiD.
 
     0.672
gsiA_4
Glutathione import ATP-binding protein GsiA; Belongs to the ABC transporter superfamily.
       0.625
gsiC_5
Glutathione transport system permease protein GsiC.
       0.625
tetR
Tetracycline repressor protein class H.
 
     0.601
KJL41550.1
Hypothetical protein.
       0.520
arnC_1
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
  
    0.464
KJL40694.1
Hypothetical protein.
  
     0.427
kynB
Kynurenine formamidase.
  
     0.423
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.