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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaA1,2-phenylacetyl-CoA epoxidase, subunit A. (319 aa)    
Predicted Functional Partners:
paaB
1,2-phenylacetyl-CoA epoxidase, subunit B.
 
 0.998
paaC
1,2-phenylacetyl-CoA epoxidase, subunit C.
  
  0.997
paaE
1,2-phenylacetyl-CoA epoxidase, subunit E.
 
 0.997
paaD
Putative 1,2-phenylacetyl-CoA epoxidase, subunit D.
 
 
 0.995
paaI
Acyl-coenzyme A thioesterase PaaI.
 
 
  0.990
fadB_2
Putative enoyl-CoA hydratase.
  
 
  0.969
paaZ_1
Bifunctional protein PaaZ.
 
  
 0.941
fcbB2
4-chlorobenzoyl coenzyme A dehalogenase-2; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.875
echA8_3
Putative enoyl-CoA hydratase echA8.
  
 
  0.817
echA8_2
Putative enoyl-CoA hydratase echA8; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 
  0.744
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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