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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
bmrAMultidrug resistance ABC transporter ATP-binding/permease protein BmrA. (665 aa)    
Predicted Functional Partners:
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
  0.845
drrA_8
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
 
0.841
potA_2
Spermidine/putrescine import ATP-binding protein PotA; Part of the ABC transporter complex PotABCD involved in spermidine/putrescine import. Responsible for energy coupling to the transport system.
 
  
 
0.779
KJL41021.1
PspC domain protein.
   
  0.760
sugC
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
 
   
 
0.754
geoA
Geraniol dehydrogenase.
   
  0.739
xylB_1
Aryl-alcohol dehydrogenase.
   
  0.739
adhD
Putative alcohol dehydrogenase D.
   
  0.739
KJL41595.1
Fluoroquinolones export ATP-binding protein.
  
 
0.736
yxlF_1
Putative ABC transporter ATP-binding protein YxlF.
  
 
0.731
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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