STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yvoAHTH-type transcriptional repressor YvoA. (252 aa)    
Predicted Functional Partners:
KJL40626.1
Hypothetical protein.
 
     0.894
iolC_2
5-dehydro-2-deoxygluconokinase.
 
  
  0.890
iolB
5-deoxy-glucuronate isomerase.
 
     0.833
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase.
 
  
 0.819
iolE_2
Inosose dehydratase.
 
  
 0.794
ptsG
PTS system glucose-specific EIICBA component.
  
 
 0.704
KJL40632.1
Xylose isomerase-like TIM barrel.
 
    0.672
iolG_3
Inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase.
 
    0.637
KJL41569.1
Putative HTH-type transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
   
    0.568
mmsA_1
Methylmalonate-semialdehyde dehydrogenase [acylating].
 
     0.544
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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