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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sttHStreptothricin hydrolase. (185 aa)    
Predicted Functional Partners:
accA1_1
Acetyl-/propionyl-coenzyme A carboxylase alpha chain.
  
 
 0.802
ydcV_2
Inner membrane ABC transporter permease protein YdcV.
       0.686
potB
Spermidine/putrescine transport system permease protein PotB.
       0.686
potD_2
Spermidine/putrescine-binding periplasmic protein precursor.
       0.686
fabG_6
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
   
  0.585
dhbC
Isochorismate synthase DhbC.
     
 0.575
trpE
Anthranilate synthase component 1.
    
 0.558
gnl
Gluconolactonase precursor.
  
 
  0.548
puuB_2
Gamma-glutamylputrescine oxidoreductase.
  
    0.516
gpsA
Glycerol-3-phosphate dehydrogenase [NAD(P)+]; Belongs to the NAD-dependent glycerol-3-phosphate dehydrogenase family.
  
   0.512
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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