rpoC protein (Microbacterium trichothecenolyticum)

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Score

rpoC

DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. (1290 aa)

Predicted Functional Partners:

sigL

0.999

sigR

0.999

carD

0.999

helD

0.999

rpoB

0.999

rpoA

0.999

KJL40238.1

0.999

rbpA_2

0.999

rpoZ

0.999

hrdB

0.999

Your Current Organism:

Microbacterium trichothecenolyticum

NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KJL40238.1	hrdB	RS82_03564	RS82_03956	Bacterial transcription activator, effector binding domain.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.999
KJL40238.1	rpoA	RS82_03564	RS82_03412	Bacterial transcription activator, effector binding domain.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
KJL40238.1	rpoB	RS82_03564	RS82_03361	Bacterial transcription activator, effector binding domain.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
KJL40238.1	rpoC	RS82_03564	RS82_03362	Bacterial transcription activator, effector binding domain.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
KJL40238.1	rpoZ	RS82_03564	RS82_03874	Bacterial transcription activator, effector binding domain.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
carD	hrdB	RS82_01628	RS82_03956	RNA polymerase-binding transcription factor CarD.	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.999
carD	rbpA_2	RS82_01628	RS82_03817	RNA polymerase-binding transcription factor CarD.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.999
carD	rpoA	RS82_01628	RS82_03412	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
carD	rpoB	RS82_01628	RS82_03361	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
carD	rpoC	RS82_01628	RS82_03362	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
carD	rpoZ	RS82_01628	RS82_03874	RNA polymerase-binding transcription factor CarD.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.999
helD	rpoA	RS82_03230	RS82_03412	Helicase IV.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.932
helD	rpoB	RS82_03230	RS82_03361	Helicase IV.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
helD	rpoC	RS82_03230	RS82_03362	Helicase IV.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
helD	rpoZ	RS82_03230	RS82_03874	Helicase IV.	DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.932
hrdB	KJL40238.1	RS82_03956	RS82_03564	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	Bacterial transcription activator, effector binding domain.	0.999
hrdB	carD	RS82_03956	RS82_01628	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	RNA polymerase-binding transcription factor CarD.	0.999
hrdB	rbpA_2	RS82_03956	RS82_03817	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	RNA polymerase-binding protein RbpA; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. Belongs to the RNA polymerase-binding protein RbpA family.	0.999
hrdB	rpoA	RS82_03956	RS82_03412	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999
hrdB	rpoB	RS82_03956	RS82_03361	RNA polymerase principal sigma factor HrdB; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.999

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