STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pknK_2Serine/threonine-protein kinase PknK. (379 aa)    
Predicted Functional Partners:
pstP_1
PP2C-family Ser/Thr phosphatase.
 
 0.906
garA
Glycogen accumulation regulator GarA.
  
 
 
 0.897
pstP_2
PP2C-family Ser/Thr phosphatase.
 
 0.895
pstP_3
PP2C-family Ser/Thr phosphatase.
 
 0.895
stp_4
Serine/threonine phosphatase stp.
 
 0.887
KJL40756.1
Hypothetical protein.
 
    0.845
KJL40760.1
FHA domain protein.
 
 
   0.830
KJL40758.1
Hypothetical protein.
 
     0.780
KJL40759.1
Transglutaminase-like superfamily protein.
 
     0.754
fhaA
FHA domain-containing protein FhaA.
 
 
 
 0.738
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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