STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
icaAPoly-beta-1,6-N-acetyl-D-glucosamine synthase. (491 aa)    
Predicted Functional Partners:
cph2_1
Phytochrome-like protein cph2.
  
 
 0.813
KJL40736.1
Hypothetical protein.
 
 
 0.772
cph2_2
Phytochrome-like protein cph2.
  
 
 0.764
KJL41581.1
Hypothetical protein.
  
 
 0.721
KJL42432.1
Hypothetical protein.
 
 
  0.692
arnC_1
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
 
 0.685
KJL42267.1
Hypothetical protein.
  
     0.663
otsA
Trehalose-phosphate synthase.
  
 
 0.661
KJL43785.1
Undecaprenyl-phosphate mannosyltransferase.
  
 
 0.610
KJL43794.1
Hypothetical protein.
 
 
 0.605
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.