STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40809.1HNH endonuclease. (465 aa)    
Predicted Functional Partners:
KJL42536.1
Hypothetical protein.
  
     0.670
KJL39629.1
Hypothetical protein.
  
     0.636
KJL45746.1
TraM recognition site of TraD and TraG.
  
 
   0.632
KJL45715.1
TraM recognition site of TraD and TraG.
  
 
   0.630
KJL40808.1
Hypothetical protein.
       0.628
KJL40381.1
Hypothetical protein.
  
     0.549
recD2_1
ATP-dependent RecD-like DNA helicase.
  
     0.511
KJL40810.1
VanZ like family protein.
       0.511
KJL40592.1
Hypothetical protein.
  
     0.503
plcB
Phospholipase C 2 precursor.
  
     0.502
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.