STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40818.1Hypothetical protein. (255 aa)    
Predicted Functional Partners:
tuaB_1
Teichuronic acid biosynthesis protein TuaB.
  
 
  0.817
mshA_5
D-inositol 3-phosphate glycosyltransferase.
       0.773
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
  0.671
otsA
Trehalose-phosphate synthase.
  
 0.608
epsO
Putative pyruvyl transferase EpsO.
  
    0.608
rfbC
Putative dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.504
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.456
glf
UDP-galactopyranose mutase.
  
 
  0.440
amy
Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family.
   
 0.427
dnaX_1
DNA polymerase III subunit tau.
  
   0.417
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.