STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aceCGDP-mannose:cellobiosyl-diphosphopolyprenol alpha-mannosyltransferase. (368 aa)    
Predicted Functional Partners:
gumD
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.924
glgB
1,4-alpha-glucan branching enzyme GlgB; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
   
 0.699
ywqD
Tyrosine-protein kinase YwqD.
  
 0.666
mshA_5
D-inositol 3-phosphate glycosyltransferase.
     0.637
otsA
Trehalose-phosphate synthase.
  
 0.608
epsL_2
Putative sugar transferase EpsL.
 
    0.524
oatA_4
O-acetyltransferase OatA.
  
    0.518
epsL_1
Putative sugar transferase EpsL.
 
    0.515
malP
Maltodextrin phosphorylase.
   
 0.510
rfbC
Putative dTDP-4-dehydrorhamnose 3,5-epimerase.
  
  
 0.504
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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