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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
levB_1Levanbiose-producing levanase; Belongs to the glycosyl hydrolase 32 family. (545 aa)    
Predicted Functional Partners:
lsdA
Levansucrase precursor; Belongs to the glycosyl hydrolase 68 family.
 
  
 0.957
ptsG
PTS system glucose-specific EIICBA component.
  
 
 0.953
fruA
PTS system fructose-specific EIIABC component.
   
 
 0.904
KJL43588.1
PTS system beta-glucoside-specific transporter subunits IIABC.
 
 
 0.865
ydjH
Putative sugar kinase YdjH.
 
  0.829
KJL40841.1
Hypothetical protein; Glycosyl hydrolases family 32 N-terminal domain.
 
  
  0.780
iolC_1
5-dehydro-2-deoxygluconokinase.
  
 
  0.737
yicI
Alpha-xylosidase; Belongs to the glycosyl hydrolase 31 family.
     
 0.674
malZ
Maltodextrin glucosidase; Belongs to the glycosyl hydrolase 13 family.
   
 
  0.672
amy
Alpha-amylase precursor; Belongs to the glycosyl hydrolase 13 family.
 
 
 0.622
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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