STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJL40162.1Hypothetical protein. (494 aa)    
Predicted Functional Partners:
KJL42536.1
Hypothetical protein.
  
     0.756
KJL39629.1
Hypothetical protein.
  
     0.730
KJL40592.1
Hypothetical protein.
  
     0.701
KJL45746.1
TraM recognition site of TraD and TraG.
  
 
   0.629
KJL45715.1
TraM recognition site of TraD and TraG.
    
   0.581
KJL40161.1
Putative nucleotidyltransferase.
       0.526
KJL40163.1
Hypothetical protein.
       0.524
KJL44335.1
Alpha/beta hydrolase family protein.
  
     0.507
KJL41557.1
Hypothetical protein.
  
     0.505
KJL40164.1
Pyridoxamine 5'-phosphate oxidase.
       0.444
Your Current Organism:
Microbacterium trichothecenolyticum
NCBI taxonomy Id: 69370
Other names: ATCC 51475, Aureibacterium trichothecenolyticum, Aureobacterium trichothecenolyticum, CIP 103817, DSM 8608, IFO 15077, LMG 16696, LMG:16696, M. trichothecenolyticum, Microbacterium sp. BDR3P1B1, NBRC 15077
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.