STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_01520Putative formate--tetrahydrofolate ligase; Fragment; Belongs to the formate--tetrahydrofolate ligase family. (142 aa)    
Predicted Functional Partners:
OBV_01500
Putative formate--tetrahydrofolate ligase; Fragment; Belongs to the formate--tetrahydrofolate ligase family.
     0.989
OBV_06480
Putative phosphoribosylformylglycinamidine synthase.
  
 
 0.861
OBV_38960
Glycine cleavage T protein/serine hydroxymethyltransferase; Bifunctional protein; protein synonym:aminomethyltransferase/serine hydroxymethyltransferase.
  
 
 0.756
OBV_06500
Putative phosphoribosylaminoimidazolecarboxamide formyltransferase; Protein synonym:AICAR formyltransferase; protein synonym:AICARFT.
  
 
 0.663
purC
Phosphoribosylaminoimidazole-succinocarboxamide synthase; Belongs to the SAICAR synthetase family.
  
 
 0.649
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.631
purF
Amidophosphoribosyltransferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine.
  
  
 0.605
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
  
 
 0.532
purD
Phosphoribosylamine--glycine ligase; Protein synonym:glycinamide ribonucleotide synthetase; protein synonym:phosphoribosylglycinamide synthetase; Belongs to the GARS family.
  
 
 0.485
purE
Phosphoribosylaminoimidazole carboxylase; Catalyzes the conversion of N5-carboxyaminoimidazole ribonucleotide (N5-CAIR) to 4-carboxy-5-aminoimidazole ribonucleotide (CAIR).
  
    0.481
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.