STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_02130Hypothetical protein. (384 aa)    
Predicted Functional Partners:
gltB
Glutamate synthase large subunit; Protein synonym:GLTS alpha chain; protein synonym:NADPH-GOGAT; protein synonym:glutamate synthase [NADPH] alpha subunit.
   
 0.955
OBV_02170
Glucosamine-6-phosphate isomerase family protein.
  
 
 0.945
carB
Carbamoyl-phosphate synthase large chain/diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan. Belongs to the CarB family.
 
 
 0.945
OBV_34760
Hypothetical protein.
  
  
  0.931
glmS
Glucosamine-6-phosphate synthase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
  
 
0.929
OBV_34600
Hypothetical protein.
  
  
  0.928
carA
Protein synonym:carbamoyl-phosphate synthetase glutamine chain; Belongs to the CarA family.
 
  
 0.926
glnA
Glutamine synthetase I; Protein synonym:GSI; protein synonym:glutamate--ammonia ligase.
  
 
 0.921
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.913
OBV_43480
Hypothetical protein.
    
 0.913
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.