STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_02170Glucosamine-6-phosphate isomerase family protein. (302 aa)    
Predicted Functional Partners:
OBV_43480
Hypothetical protein.
 
 0.998
pgi
Protein synonym:phosphoglucose isomerase; Belongs to the GPI family.
 
 0.949
OBV_02130
Hypothetical protein.
  
 
 0.945
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.928
glmS
Glucosamine-6-phosphate synthase; Catalyzes the first step in hexosamine metabolism, converting fructose-6P into glucosamine-6P using glutamine as a nitrogen source.
  
 
 0.918
OBV_34600
Hypothetical protein.
  
 
 0.918
OBV_34760
Hypothetical protein.
  
 
 0.918
frk-2
Putative fructokinase; Belongs to the carbohydrate kinase PfkB family.
  
 
 0.913
OBV_02160
Putative sugar ABC transporter permease protein.
     
 0.753
OBV_02180
Putative ribokinase; Belongs to the carbohydrate kinase PfkB family.
  
  
 0.741
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.