Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
gapGlyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. (340 aa)    
Predicted Functional Partners:
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 0.999
pgk
Protein synonym:3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
 0.998
fba
Fructose-bisphosphate aldolase.
  
 0.979
pgi
Protein synonym:phosphoglucose isomerase; Belongs to the GPI family.
  
 0.953
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
 
 
 0.951
OBV_37250
Putative transketolase; Fragment.
    
 0.906
OBV_37260
Putative transketolase; Fragment.
    
  0.905
gap-2
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
  
 
0.903
eda
4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate; Bifunctional protein.
  
 
 0.839
xfp
Xylulose-5-phosphate phosphoketolase/fructose-6-phosphate phosphoketolase; Bifunctional protein.
    
 0.834
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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