STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gpmI2,3-bisphosphoglycerate-independent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate. (505 aa)    
Predicted Functional Partners:
pgk
Protein synonym:3-phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
  
 
 0.997
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
  
 
 0.966
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
    
 0.957
pgi
Protein synonym:phosphoglucose isomerase; Belongs to the GPI family.
  
 
 0.922
OBV_12360
Ribonuclease; Protein synonym:RNase.
   
 0.918
OBV_37480
Glycerate kinase; Belongs to the glycerate kinase type-1 family.
     
 0.913
gyaR
Glyoxylate reductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
OBV_10850
Oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
OBV_11560
Oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
OBV_24290
Oxidoreductase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.903
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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