Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| OBV_04740 | OBV_04750 | OBV_04740 | OBV_04750 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Putative glycine dehydrogenase. | 0.999 |
| OBV_04740 | OBV_04760 | OBV_04740 | OBV_04760 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | ATP-NAD/AcoX kinase family protein. | 0.920 |
| OBV_04740 | OBV_38930 | OBV_04740 | OBV_38930 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Protein synonym:glycine dehydrogenase subunit 2. | 0.999 |
| OBV_04740 | OBV_38960 | OBV_04740 | OBV_38960 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine cleavage T protein/serine hydroxymethyltransferase; Bifunctional protein; protein synonym:aminomethyltransferase/serine hydroxymethyltransferase. | 0.998 |
| OBV_04740 | acoL | OBV_04740 | OBV_21380 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Acetoin dehydrogenase E3 component; Protein synonym:dihydrolipoyl dehydrogenase. | 0.960 |
| OBV_04740 | gcvH | OBV_04740 | OBV_38950 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.997 |
| OBV_04740 | glyA | OBV_04740 | OBV_15680 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.946 |
| OBV_04740 | glyA-2 | OBV_04740 | OBV_16360 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.946 |
| OBV_04740 | lpd | OBV_04740 | OBV_26990 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Protein synonym:pyruvate dehydrogenase E3 component. | 0.941 |
| OBV_04740 | lpd-2 | OBV_04740 | OBV_38920 | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | Protein synonym:dihydrolipoyl dehydrogenase; protein synonym:glycine cleavage system L protein. | 0.941 |
| OBV_04750 | OBV_04740 | OBV_04750 | OBV_04740 | Putative glycine dehydrogenase. | Putative glycine dehydrogenase; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein. | 0.999 |
| OBV_04750 | OBV_04760 | OBV_04750 | OBV_04760 | Putative glycine dehydrogenase. | ATP-NAD/AcoX kinase family protein. | 0.922 |
| OBV_04750 | OBV_38930 | OBV_04750 | OBV_38930 | Putative glycine dehydrogenase. | Protein synonym:glycine dehydrogenase subunit 2. | 0.911 |
| OBV_04750 | OBV_38960 | OBV_04750 | OBV_38960 | Putative glycine dehydrogenase. | Glycine cleavage T protein/serine hydroxymethyltransferase; Bifunctional protein; protein synonym:aminomethyltransferase/serine hydroxymethyltransferase. | 0.999 |
| OBV_04750 | acoL | OBV_04750 | OBV_21380 | Putative glycine dehydrogenase. | Acetoin dehydrogenase E3 component; Protein synonym:dihydrolipoyl dehydrogenase. | 0.969 |
| OBV_04750 | gcvH | OBV_04750 | OBV_38950 | Putative glycine dehydrogenase. | Glycine cleavage system H protein; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.997 |
| OBV_04750 | glyA | OBV_04750 | OBV_15680 | Putative glycine dehydrogenase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.961 |
| OBV_04750 | glyA-2 | OBV_04750 | OBV_16360 | Putative glycine dehydrogenase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.961 |
| OBV_04750 | lpd | OBV_04750 | OBV_26990 | Putative glycine dehydrogenase. | Protein synonym:pyruvate dehydrogenase E3 component. | 0.950 |
| OBV_04750 | lpd-2 | OBV_04750 | OBV_38920 | Putative glycine dehydrogenase. | Protein synonym:dihydrolipoyl dehydrogenase; protein synonym:glycine cleavage system L protein. | 0.956 |
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