STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hypFHydrogenase maturation protein HypF; Belongs to the carbamoyltransferase HypF family. (771 aa)    
Predicted Functional Partners:
hypE
Hydrogenase formation protein HypE.
 
 
 0.997
hypC
Hydrogenase formation protein HypC.
 
 
 0.985
hypD
Hydrogenase formation protein HypD.
 
  
 0.984
OBV_07130
Putative NiFe hydrogenase large subunit; Belongs to the [NiFe]/[NiFeSe] hydrogenase large subunit family.
 
 
 
 0.970
OBV_07120
Putative NiFe hydrogenase small subunit.
 
 
 
 0.966
OBV_07140
Hypothetical protein.
 
   
 0.896
OBV_07150
Hypothetical protein.
       0.831
OBV_07110
Hypothetical protein.
       0.804
OBV_07100
Hypothetical protein.
       0.480
OBV_43640
Hypothetical protein.
  
  
 0.477
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.