STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_09280Hypothetical protein. (301 aa)    
Predicted Functional Partners:
OBV_09300
Hypothetical protein.
 
     0.864
OBV_09290
Hypothetical protein.
 
    
0.813
OBV_09270
Hypothetical protein.
 
     0.788
OBV_09210
Hypothetical protein.
 
     0.694
OBV_06270
Putative acetyltransferase.
 
    0.627
OBV_09250
Hypothetical protein.
 
     0.586
OBV_09240
Hypothetical protein.
 
     0.581
OBV_09260
Putative helicase.
 
     0.547
OBV_09000
Hypothetical protein.
  
     0.508
OBV_34570
Hypothetical protein.
  
     0.460
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.