STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_09490Putative serine acetyltransferase. (157 aa)    
Predicted Functional Partners:
OBV_33790
Cysteine synthase; Protein synonym:O-acetylserine (thiol)-lyase; protein synonym:O-acetylserine sulfhydrylase; Belongs to the cysteine synthase/cystathionine beta- synthase family.
 
 0.995
OBV_28290
Putative cysteine synthase; Protein synonym:O-acetylserine (thiol)-lyase; protein synonym:O-acetylserine sulfhydrylase.
  
 0.985
cysE
Serine acetyltransferase.
  
  
 
0.923
sdhB
L-serine dehydratase beta chain; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.904
sdhA
L-serine dehydratase alpha chain; Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.904
OBV_37200
Protein synonym:L-serine deaminase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
     
 0.904
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
  
 0.850
hom
Homoserine dehydrogenase.
     
 0.813
glyA
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.811
glyA-2
Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism.
     
 0.811
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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