STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_10550Amino acid ABC transporter permease protein. (296 aa)    
Predicted Functional Partners:
OBV_10540
Amino acid ABC transporter ATP-binding protein.
 0.999
OBV_10560
Amino acid ABC transporter amino acid-binding protein.
 0.999
OBV_11080
Amino acid ABC transporter amino acid-binding protein.
 0.996
OBV_11100
Amino acid ABC transporter ATP-binding protein.
 0.985
OBV_23060
Putative amino acid ABC transporter ATP-binding protein.
 0.985
OBV_23040
Putative amino acid ABC transporter amino acid-binding protein; Belongs to the bacterial solute-binding protein 3 family.
 0.944
OBV_11090
Amino acid ABC transporter permease protein.
  
  
 
0.789
OBV_23050
Putative amino acid ABC transporter permease protein.
  
  
 
0.789
OBV_40330
Putative ABC transporter substrate-binding protein.
  
 
 0.748
OBV_00970
ABC transporter permease protein.
   
 
 0.744
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
Server load: medium (48%) [HD]