STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_10790OmpR family two-component response regulator. (231 aa)    
Predicted Functional Partners:
OBV_10780
Putative two-component histidine kinase.
   0.972
OBV_45650
OmpR family two-component response regulator.
  
  
 
0.905
OBV_34890
Hypothetical protein.
 
 
0.893
OBV_36500
Putative two-component histidine kinase.
   0.881
OBV_41240
Hypothetical protein.
 
0.869
OBV_45660
Putative two-component histidine kinase.
   0.865
OBV_13140
Putative two-component histidine kinase.
 
 0.863
OBV_02420
Hypothetical protein.
   0.848
OBV_00780
Putative two-component histidine kinase.
   0.842
OBV_07270
Putative two-component histidine kinase.
   0.826
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.