STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_13120Hypothetical protein. (122 aa)    
Predicted Functional Partners:
OBV_24480
Hypothetical protein.
 
  
 0.834
OBV_10140
Putative general secretion pathway protein F.
  
  
 0.818
OBV_13130
OmpR family two-component response regulator.
       0.720
OBV_13150
Putative germination protein.
  
    0.717
OBV_13140
Putative two-component histidine kinase.
       0.631
OBV_42800
Peptidase A24A family protein.
   
  
 0.620
OBV_44950
Peptidase A24A family protein.
   
  
 0.620
OBV_13160
Hypothetical protein.
       0.611
cinA
Putative competence-damage inducible protein; Belongs to the CinA family.
     
 0.582
OBV_13110
D-alanyl-D-alanine carboxypeptidase; Protein synonym:DD-peptidase; Belongs to the peptidase S11 family.
     
 0.521
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.