STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_13980Hypothetical protein. (564 aa)    
Predicted Functional Partners:
OBV_37470
Hypothetical protein.
 
 0.995
OBV_13990
Hypothetical protein.
 
  
 0.989
OBV_35170
Hypothetical protein.
   0.987
OBV_46130
Hypothetical protein.
   0.987
OBV_40250
Hypothetical protein.
 
 
 0.939
OBV_14030
Hypothetical protein.
 
     0.640
OBV_14010
Hypothetical protein.
 
     0.622
polC
PolC-type DNA polymerase I; Required for replicative DNA synthesis. This DNA polymerase also exhibits 3' to 5' exonuclease activity.
 
     0.619
coaD
Phosphopantetheine adenylyltransferase; Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate. Belongs to the bacterial CoaD family.
 
     0.615
OBV_36570
Hypothetical protein.
  
   0.529
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.