STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_14280Hypothetical protein. (250 aa)    
Predicted Functional Partners:
OBV_14310
Hypothetical protein.
 
   
 0.893
OBV_18900
Hypothetical protein.
  
     0.681
OBV_14270
Hypothetical protein.
       0.641
OBV_40530
Putative 2',3'-cyclic-nucleotide 2'-phosphodiesterase; Belongs to the 5'-nucleotidase family.
  
  
 0.588
OBV_14240
Hypothetical protein.
       0.572
OBV_14250
Hypothetical protein.
       0.572
OBV_14260
Hypothetical protein.
       0.572
OBV_14290
Hypothetical protein.
       0.559
birA
Transcriptional regulator/biotin--[acetyl-CoA-carboxylase] ligase; Acts both as a biotin--[acetyl-CoA-carboxylase] ligase and a repressor; Belongs to the biotin--protein ligase family.
      
 0.525
OBV_18940
Hypothetical protein.
  
   
 0.454
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.