STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_14910Hypothetical protein. (394 aa)    
Predicted Functional Partners:
OBV_14920
Putative methyltransferase.
 
     0.804
OBV_14900
Hypothetical protein.
       0.773
cdr
Protein synonym:CoA-disulfide reductase; Belongs to the sulfur carrier protein TusA family.
  
 0.650
OBV_03580
Hypothetical protein.
 
  
 0.614
OBV_14930
Putative zinc transporter.
   
   0.565
acoL
Acetoin dehydrogenase E3 component; Protein synonym:dihydrolipoyl dehydrogenase.
   
 0.549
OBV_14890
Putative TetR family transcriptional regulator.
  
    0.543
OBV_05410
Putative nucleotide sugar epimerase/dehydratase.
   
 0.537
OBV_08450
Oxidoreductase.
 
 0.537
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
  
 0.533
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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