STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_15100Putative ABC transporter permease/ATP-binding protein. (575 aa)    
Predicted Functional Partners:
pstB
Phosphate ABC transporter ATP-binding protein; Part of the ABC transporter complex PstSACB involved in phosphate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Phosphate importer (TC 3.A.1.7) family.
 
   
 
0.928
OBV_02190
Putative sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
   
 
0.905
OBV_11100
Amino acid ABC transporter ATP-binding protein.
 
   
 
0.903
OBV_28920
ABC transporter ATP-binding protein.
 
 
 
0.903
OBV_05310
Putative ABC transporter ATP-binding protein.
   
 
0.901
OBV_15110
Putative ABC transporter permease/ATP-binding protein.
 
    
0.812
OBV_15130
ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.807
OBV_43760
iron(III) ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
 
 
 
0.790
OBV_05580
Putative ABC transporter ATP-binding protein.
  
 
0.777
OBV_15140
ABC transporter ATP-binding protein.
 
 
 
0.769
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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