STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_16720Putative transposase orfB for insertion sequence element. (146 aa)    
Predicted Functional Partners:
OBV_00930
Putative transposase; Fragment.
  
     0.561
OBV_16710
Putative transposase orfB for insertion sequence element.
       0.543
OBV_06870
Putative transposase; Fragment.
  
     0.522
OBV_16130
Putative transposase; Fragment.
  
     0.522
OBV_33620
Putative transposase; Fragment.
  
     0.522
OBV_17750
Putative transposase; Fragment.
  
     0.492
OBV_16700
Putative transposase orfA for insertion sequence element.
  
    0.445
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.