STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_17680Hypothetical protein. (103 aa)    
Predicted Functional Partners:
OBV_17660
Hypothetical protein.
 
   
 0.926
OBV_17670
Hypothetical protein; Belongs to the EutP/PduV family.
 
     0.874
OBV_17630
Hypothetical protein.
 
     0.859
OBV_17640
Hypothetical protein.
 
     0.653
OBV_17490
Hypothetical protein.
 
   
 0.611
OBV_17610
Hypothetical protein.
 
   
 0.596
OBV_17550
Hypothetical protein.
 
   
 0.556
OBV_17480
Putative ferredoxin.
 
     0.550
OBV_17620
Hypothetical protein; Involved in 1,2-propanediol (1,2-PD) degradation by catalyzing the conversion of propanoyl-CoA to propanoyl-phosphate.
 
     0.538
OBV_17540
Hypothetical protein.
 
   
 0.482
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
Server load: medium (60%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.