STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_19040Putative Xre family DNA-binding protein. (96 aa)    
Predicted Functional Partners:
OBV_26460
Putative Xre family DNA-binding protein.
  
     0.754
OBV_22910
Putative Xre family DNA-binding protein.
  
     0.752
OBV_32330
Putative Xre family DNA-binding protein.
  
     0.745
OBV_20590
Putative Xre family DNA-binding protein.
  
     0.739
OBV_03840
Putative Xre family DNA-binding protein.
  
     0.701
OBV_13610
Putative DNA-binding protein.
  
     0.681
OBV_25500
Putative Xre family DNA-binding protein.
  
     0.596
sodA
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
       0.521
OBV_35760
Putative Xre family DNA-binding protein.
  
     0.501
OBV_30760
Putative Xre family DNA-binding protein.
  
     0.454
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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