STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_23770Hypothetical protein. (244 aa)    
Predicted Functional Partners:
spoIIIAB
Putative stage III sporulation protein AB.
       0.508
spoIIIAA
Stage III sporulation protein AA.
       0.508
spoIIIAE
Putative stage III sporulation protein AE.
       0.463
spoIIIAD
Putative stage III sporulation protein AD.
       0.463
spoIIIAC
Stage III sporulation protein AC.
       0.463
spoIIIAG
Putative stage III sporulation protein AG.
       0.442
spoIIIAF
Putative stage III sporulation protein AF.
       0.442
spoIIIAH
Putative stage III sporulation protein AH.
       0.409
OBV_23780
Hypothetical protein.
       0.406
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.