OBV_25560 protein (Oscillibacter valericigenes)

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Score

OBV_25560

Hypothetical protein. (61 aa)

Predicted Functional Partners:

OBV_25540

0.639

OBV_25550

0.639

greA-2

0.523

lysS

0.513

Your Current Organism:

Oscillibacter valericigenes

NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OBV_25540	OBV_25550	OBV_25540	OBV_25550	Putative metalloendopeptidase.	Peptidase M50 family protein.	0.880
OBV_25540	OBV_25560	OBV_25540	OBV_25560	Putative metalloendopeptidase.	Hypothetical protein.	0.639
OBV_25540	greA-2	OBV_25540	OBV_25570	Putative metalloendopeptidase.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.441
OBV_25540	lysS	OBV_25540	OBV_25580	Putative metalloendopeptidase.	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.434
OBV_25550	OBV_25540	OBV_25550	OBV_25540	Peptidase M50 family protein.	Putative metalloendopeptidase.	0.880
OBV_25550	OBV_25560	OBV_25550	OBV_25560	Peptidase M50 family protein.	Hypothetical protein.	0.639
OBV_25550	greA-2	OBV_25550	OBV_25570	Peptidase M50 family protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.468
OBV_25550	lysS	OBV_25550	OBV_25580	Peptidase M50 family protein.	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.465
OBV_25560	OBV_25540	OBV_25560	OBV_25540	Hypothetical protein.	Putative metalloendopeptidase.	0.639
OBV_25560	OBV_25550	OBV_25560	OBV_25550	Hypothetical protein.	Peptidase M50 family protein.	0.639
OBV_25560	greA-2	OBV_25560	OBV_25570	Hypothetical protein.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.523
OBV_25560	lysS	OBV_25560	OBV_25580	Hypothetical protein.	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.513
greA-2	OBV_25540	OBV_25570	OBV_25540	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Putative metalloendopeptidase.	0.441
greA-2	OBV_25550	OBV_25570	OBV_25550	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Peptidase M50 family protein.	0.468
greA-2	OBV_25560	OBV_25570	OBV_25560	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	Hypothetical protein.	0.523
greA-2	lysS	OBV_25570	OBV_25580	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	0.786
lysS	OBV_25540	OBV_25580	OBV_25540	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	Putative metalloendopeptidase.	0.434
lysS	OBV_25550	OBV_25580	OBV_25550	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	Peptidase M50 family protein.	0.465
lysS	OBV_25560	OBV_25580	OBV_25560	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	Hypothetical protein.	0.513
lysS	greA-2	OBV_25580	OBV_25570	lysyl-tRNA synthetase; Protein synonym:lysine--tRNA ligase; Belongs to the class-II aminoacyl-tRNA synthetase family.	Transcription elongation factor GreA; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreA releases sequences of 2 to 3 nucleotides.	0.786