STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_30250Hypothetical protein. (96 aa)    
Predicted Functional Partners:
OBV_30260
Hypothetical protein.
       0.793
topB
DNA topoisomerase III.
       0.790
OBV_30240
Hypothetical protein.
       0.786
OBV_30290
Hypothetical protein.
       0.782
OBV_30230
Hypothetical protein.
       0.773
OBV_30270
Hypothetical protein.
       0.773
OBV_30210
Hypothetical protein.
       0.718
OBV_30220
TraE family protein.
       0.713
OBV_30200
Hypothetical protein.
       0.688
OBV_30310
Hypothetical protein.
       0.542
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.