STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_33430Putative CoA-transferase alpha subunit. (230 aa)    
Predicted Functional Partners:
OBV_33420
Putative CoA-transferase beta subunit; Fragment.
 0.999
OBV_33410
Putative CoA-transferase beta subunit; Fragment.
 
 
 0.995
adhE
Acetaldehyde dehydrogenase/alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 
 0.940
OBV_02900
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.935
OBV_24170
Putative acetyl-CoA acetyltransferase; Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.935
OBV_40710
Protein synonym:acetoacetyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family.
 
 
 0.935
gctB
Protein synonym:GCT small subunit.
  
 
 0.926
acdA
acyl-CoA dehydrogenase.
 
 
 0.910
acdA-2
acyl-CoA dehydrogenase.
 
 
 0.910
OBV_33440
Hypothetical protein.
       0.557
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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