STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OBV_34360ABC transporter ATP-binding protein. (209 aa)    
Predicted Functional Partners:
OBV_14700
Putative molybdate ABC transporter ATP-binding protein.
 
  
 
0.954
ecfA
Putative cobalt ABC transporter ATP-binding protein; ATP-binding (A) component of a common energy-coupling factor (ECF) ABC-transporter complex. Unlike classic ABC transporters this ECF transporter provides the energy necessary to transport a number of different substrates.
 
 
 
0.953
OBV_05580
Putative ABC transporter ATP-binding protein.
 
  
 
0.947
OBV_11100
Amino acid ABC transporter ATP-binding protein.
 
  
 
0.945
OBV_11200
Branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 
0.937
OBV_02190
Putative sugar ABC transporter ATP-binding protein; Belongs to the ABC transporter superfamily.
 
  
 
0.932
OBV_28920
ABC transporter ATP-binding protein.
 
    
0.923
OBV_24410
Putative ABC transporter ATP-binding protein.
 
    
0.921
OBV_26650
Putative osmoprotectant ABC transporter ATP-binding protein.
 
  
 
0.909
OBV_36860
Branched-chain amino acid ABC transporter ATP-binding protein.
 
  
 
0.862
Your Current Organism:
Oscillibacter valericigenes
NCBI taxonomy Id: 693746
Other names: O. valericigenes Sjm18-20, Oscillibacter valericigenes NBRC 101213, Oscillibacter valericigenes Sjm18-20
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